miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|75477293|gb|AM065088.1|AM065088 GTCGCGCCGGGCGGGCGGGCGATGGCGGCGCAGTTCCGCAGCTACGTGTGGGACCCGGCGCTGATCGTGGCGCAGATGGT
GCTGCTGCAGGCCGCGTACTACAGCTCGCTCGGGCTCTGGCTCGCCCTCCTCGGCGCCCTCGGCAGCACCGGGCCCTCCC
TCCACCAGATCTTCAGCGACGAGATTCTAGGCTTCTCGACTCCGCCTGGGAGGCTGTCCATGATGGCTTTCGTCCTCAAT
GCACTCACCTGTGCTCTGGGCTTGCTGTACTTTATCCGGCGAGGAAAACAGTGCTTGGATTTCACAGTCACAGTTCATTT
CTTCCATCTTCTGGGCTGCTGGATTTATAACTCACACTTTCCCTCGACTCTGACGTGGTGGCTGGTGCACATTGTGTGCA
CAGCACTGATGGCTGCAATTGGGGAGTACCTCTGCATGAGGATAGAACTGAGGGAGATCCCACTGAATTCCGCTCCCAAA
TCCAATGTATAACTTGCTCTGGCAACAACATGCTGCATTGCGTCATTGTTTCCAGCACAAGTACATCTAATGCCTGAAAG
TCATCACTGAAGAAGCACAGCAGGTCTGTTGAGACTTTTTTTTTTTTTAAAGACTGCGTGAGTGTGAGCATCTCCTCTGT
CATCATCAGACAGCAGA




Most similar to sp|A4K2W1|SYS1_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|A4K2W1|SYS1_PONAB Protein SYS1 homolog OS=Pongo abelii GN=SYS1
           PE=3 SV=1
          Length = 156

 Score =  227 bits (579), Expect = 4e-59
 Identities = 110/156 (70%), Positives = 119/156 (76%)
 Frame = +1

Query: 22  MAAQFRSYVWDPALIVAQMVLLQXXXXXXXXXXXXXXXXXXXXXXXXHQIFSDEILGFST 201
           MA QFRSYVWDP LI++Q+VL+Q                         Q+F  EILGFST
Sbjct: 1   MAGQFRSYVWDPLLILSQIVLMQTVYYGSLGLWLALVDGLVRSSPSLDQMFDAEILGFST 60

Query: 202 PPGRLSMMAFVLNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWIYNSHFPSTLTWW 381
           PPGRLSMM+F+LNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCW Y+S FPS LTWW
Sbjct: 61  PPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVHFFHLLGCWFYSSRFPSALTWW 120

Query: 382 LVHIVCTALMAAIGEYLCMRIELREIPLNSAPKSNV 489
           LV  VC ALMA IGEYLCMR EL+EIPLNSAPKSNV
Sbjct: 121 LVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156